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Understanding Rhizophagy with James White, a new online course on the academy

Rhizophagy or root feeding is the science describing plant absorption of living microbial cells directly from the soil, particularly bacterial endophytes. These absorbed microbial cells provide nutrients to the plant cells directly, they change root system development, they trigger the formation of root hairs, and they remain free living within the plant.

I first introduced James White’s research in this post. Our podcast interview is among the most popular of all our episodes, which is the best evidence of how valuable growers and agronomists are finding his information.

As with so many of these exciting agronomic topics, there is much more information that there is time to describe it all during an interview. James is teaching all of the details in a new online course that is available on the Regen.Ag Academy today for the first time.

You don’t want to miss it.

 

2020-05-03T05:05:58-05:00May 1st, 2020|Tags: , , |

Direct absorption of molecules

The implications of plant absorption of large molecules and endocytosis are that the present mainstream model of agronomy based on measuring and managing nutrient ions is significantly incomplete, and can not be the basis for a regenerative agriculture without additional testing and management paradigms.

Bargyla Rateaver was one of the first, if not the first advocate for plant absorption of large molecules and endocytosis in North America that I am aware of. The Organic Method Primer she authored is under-appreciated for the encyclopedia of practical and agronomic knowledge it is.

Here are Bargyla’s thoughts on the subject, updated in 1993:

Direct Absorption1

Since the disastrous integration of manmade chemicals into agriculture, a huge structure of error has been built upon the false premise that “only ions can be absorbed”. Based on this, a measurement of soil and recommendation for soil have utilized the concept of “cation exchange” and the “CEC” has been the be-all of soil testing. Small structures such as ions are said to be “able to cross the membrane”. Discussions of the varied means for this fill textbook chapters on the subject of absorption.

We now know that this is all passé, an outdated formula promoted by the greedy minds of the chemical dispensers. There have been a number of investigators over the years who have documented that entire molecules were absorbed, but only small molecules. W. Flaig1 in 1968, speaking at the Vatican’s convocation on organic matter and soil fertility, entitled his work “Uptake of organic substances from soil organic matter by plants and their influence on metabolism”. In Japan, Satoshi Mori and Naoko Nishizawa proved that barley roots preferred to take up organic nitrogen compounds if offered these as well as inorganic forms.2

In the chapter on cover crops, we refer to Fritz Went, who saw in Amazon jungles that mycorrhizae absorb nutrients directly from decaying leaves on the ground. Nora M. Stark, who worked with him, in those early days before endocytosis was known, made the penetrating remark: “It is possible, that in extremely poor soils, mycorrhizae are important in supplying nutrients directly from litter to living roots”. She also mentioned that, in one case, she had “traced a hyphae from a dead fruit into a living feeder root cell”.3

Hainsworth notes, on pg 27, that carnivorous plants absorb digestion products of their prey apparently without reducing them to simple inorganic compounds.

We know now that whole molecules of any size can be taken into cells, and clusters of molecules that are particles, by endocytosis (and fluid phase endocytosis) via coated pits–extremely clever devices by an omniscient Creator: the cell membrane invaginates, trapping molecules on the clathrin-coated membrane surface, thereby forming vesicles to enclose such molecules and carry them through the cell, dropping them en route, and/or dumping unwanted or storage molecules in the vacuoles, finally returning to the cell membrane from which they came. (Plastic beads and bacteria enter via uncoated membrane regions; this takes energy. Large algal cells are taken up by fusion with the larger host protoplast, note L. C. Fowke et al.)

As there are hundreds of these coated pits and ensuing vesicles being constantly formed on cell membranes, the provision for cell absorption of compounds (and clusters of them constituting particles) is amply demonstrated; whole molecule absorption is not a small, erratic, exceptional, unusual phenomenon. On the contrary, those crowds of pits indicate that this is one of the Creator’s normal ways of circulating whatever cells need from one to another, from the environment to the cell’s interior metabolism4, or out of it to the environment, by exocytosis.

This new knowledge enables agriculture and horticulture to dispense, forever, with the theories of ion absorption. Long ago M. Dikkers told us that the plant deals with molecules, not ions.

It seems, however, that agricultural academia has either not yet caught up with the new research data, or minimizes it, or simply cannot bear to acknowledge that the monstrous pile of data accumulated throughout the world’s agricultural efforts can be wrong. One author, aware of endocytosis, nevertheless said it must be simply an adjunct to the usual ion absorption theory!

We are therefore the first to have introduced to agriculture the information and concerning the actual facts of how plants absorb through coated pits, distribute by smooth vesicles and exude via smooth vesicles, and the repercussions this implies for husbandry. It totally reverses dependence on the worthless Cation Exchange Capacity (CEC) tests, to which even organic growers still desperately cling.

We firmly believe that this discovery is the second great find of this century, second to only the disclosure/explanation of the DNA/RNA spiral, as it affects worldwide agricultural practice.

It seems that academia can afford to admit a previous error, if such does not impinge on financial benefits. In 1983 University of California researchers in San Francisco acknowledged that, although it had always been thought that a cell nucleus formed by highly complicated processes, it actually could form “spontaneously around any DNA in the cell. regardless of source, independently of genes”.

Such a nucleus had a membrane “identical to normal nuclear membrane…double layer of fat molecules pierced by many pores through which large molecules are transported”.

When confronted with his own microscopic view proving that granules can enter cells, Christopher Somerville of Michigan State University, expressed surprise. He looked at cells of an Arabidopsis thaliana hybrid, into which a plastic. PHB (polyhydroxybutyrate), made naturally by a bacterium, had been engineered. Small amounts of the plastic were made by the hybrid, in leaves, stems, roots. That the plastic occurred as particles, not ions, was undeniable, because the stained particles showed up as red dots. The dots would have had to be particles, as microscopes today are not yet able to show individual molecules (or ions!) sited in cells.

“The researchers expected to find PHB in only the cytoplasm of the plant cells, but it appears in the nucleus and vacuoles as well. That’s mysterious to us because these compartments are surrounded by membranes and it appears that the granules may be able to cross through”.5 Two strange aspects appear here: that there should be any doubt that the granules entered the cell, and that it should be surprising that they “crossed” the membranes of the cell organelles, when they must have first “crossed” the cell plasma membrane. The idea of ion entrance is implicit in the word “cross”, a concept the academic mind apparently finds almost impossible to forget; all relevant theories are based on it.

Obviously, the granules entered by endocytosis.

Much is known about this process in animal and human cells, but very little about it in plants, since there are only a handful of researchers around the world, who are working on it. Only three of them made it possible for us to show you electron micrographs depicting the stages in progress of molecules going into cells.

Plant cells differ from all others in having a cellulose wall, giving a plant rigidity; it is made of a meshwork of fibrils. It is apparently not difficult for items to pass through the cell wall, a mere tangle of microfibrils of cellulose, and there has not been any mass of data to prove or disprove this.

Inside this cellulose-mesh wall is a membrane. All living cells are surrounded by such a membrane, called in plants the cell’s plasma membrane.

No one seems to think a molecule has trouble getting through the cellulose mesh; it is confrontation with the membrane that was thought to pose all the problems. It is passage through this that has prompted so many scientists to devise explanatory theories.

In spite of all the theories, no one has ever seen the ions (such as K+), cited in soil tests, go through the membrane. Now we can track the progress of molecule masses by means of electron microscope pictures.

1 Inst, für Biochemie des Bodens der Forschungsanstalt für Landwirtschaft, Braunschweig, Germany.

2 Faculty of Agriculture, The University of Tokyo, Tokyo, Japan.

3 N. M. Stark “Mycorrhizae and Nutrient Cycling in the Tropics” in Mycorrhizae, Proceedings of the first North American Conference on Mycorrhizae, April 1969, ed. Edward Hacskaylo. Misc. Pubn 1198, USDA Forest Service, 1971.

4 Another very clever system is that of plasmodesmata, openings in contiguous cell walls, through which protoplasm (cytoplasm) is continuous from cell to cell, so that materials can move through these special, narrow passages.

5 BioOptions Vol 3 (3) pg. 2

1. Rateaver, B. & Rateaver, G. Organic Method Primer Update: A Practical Explanation : the how and why for the Beginner and the Experience. (The Rateavers, 1993). Page 21

An introduction to rhizophagy

Did you know that growing root tips can absorb entire microbial cells? Or that symbiotic endophytes change the behavior of soil-borne pathogens to become beneficial organisms, and provide nutrients to the plant?

I was delighted to discover Dr. James White’s publications on rhizophagy1 and the role of endophytes2 in plant health, and even more thrilled during our interview on the podcast with the updated information that was shared.

I have long been passionate about understand plant absorption of non-ionic nutrients. Of all the research published related to this topic in the last few years, I have been most excited by the reported capacity of growing root tips to absorb entire microbial cells and extract needed nutrients from those cells, then release some of the microbes back into the soil to repeat the process all over again.

The future of agronomy and plant nutrition will be based on understanding the science needed to supply one hundred percent of a high yielding crops nutritional requirements as microbial requirements, and not as simple ions from applied products.

I have had so many exceptional interviews on the podcast that I can’t say one is the best ever, but this one will definitely be among my personal favorites for a long time. It is a must-listen, and the papers are ‘need to read’. I highly recommend.

1. White, J. F., Kingsley, K. L., Verma, S. K. & Kowalski, K. P. Rhizophagy Cycle: An Oxidative Process in Plants for Nutrient Extraction from Symbiotic Microbes. Microorganisms 6, (2018).
2.White, J. F. et al. Review: Endophytic microbes and their potential applications in crop management. Pest Manag. Sci. 75, 2558–2565 (2019).

2020-03-16T13:57:12-05:00January 21st, 2020|Tags: , , , |
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